The subclonal footprint of pervasive early dissemination in pancreatic cancer

Authors: Yuanchang Fang, Michelle Chan-Seng-Yue, Karen Ng, Amy Zhang, Tuan Hoang, Gun Ho Jang, Sabiq Chaudhary, Catia Gaspar, Eugenia Flores-Figueroa, Daniela Bevacqua, Stephanie Ramotar, Ayelet Borgida, Shawn Hutchinson, Anna Dodd, Ayah Elqaderi, Maryam Monajemzadeh, Yifan Wang, Stanley W. K. Ng, Spring Holter, Barbara T. Grünwald, Julie M. Wilson, Robert C. Grant, Erica S. Tsang, George Zogopoulos, Masoom A. Haider, Grainne M. O’Kane, Jennifer J. Knox, Steven Gallinger, Faiyaz Notta

Reference: BioRxiv

DOI: 10.1101/2025.11.27.690823

Year: 2025

Transcriptomic classes of BCR-ABL1 lymphoblastic leukemia.

Authors: Kim, J.C.*, Chan-Seng-Yue, M., Ge, S.*, Zeng, A.G.X., Ng, K., Gan, O.I., Garcia-Prat, L., Flores-Figueroa, E., Woo, T.*, Zhang, A.X.W., Arruda, A., Chithambaram, S., Dobson, S.M., Khoo, A., Khan, S., Ibrahimova, N., George, A., Tierens, A., Hitzler, J., Kislinger, T., Dick, J.E., McPherson, J.D., Minden, M.D., Notta, F.

Reference: Nature

DOI: 10.1038/s41588-023-01429-4

Year: 2023

Transcription phenotypes of pancreatic cancer are driven by genomic events during tumour evolution

Authors: Chan-Seng-Yue, M. , Kim, J.C. , Wilson, G.W., Ng, K, Flores-Figueroa, E., O’Kane, G.M., Connor, A.A., Denroche, R.E., Grant, R.C., McLeod, J., Wilson, J.M., Jang, G.H., Zhang, A., Liang, S.-B., Borgida, A., Chadwick, D., N Kalimuthu, S.*, Lungu, I., Bartlett, J.M.S., Krzyzanowski, P.M., Sandhu, V., Tiriac, H., Froeling, F.E.M., Karasinska, J.M., Topham, J.T.,Renouf, D.J., Schaeffer, D.F., Jones, S.J.M., Marra, M.A., Laskin, J., Chetty, R., Stein, L.D., Zogopoulos, G., Haibe-Kains, B., Campbell, P.J., Tuveson, D.A., Knox, J.J., Fischer, S.E., Gallinger, S., Notta, F.

Reference: Nature

DOI: 10.1038/s41588-019-0566-9

Year: 2020

Cryptic genomic lesions in adverse-risk acute myeloid leukemia identified by integrated whole genome and transcriptome sequencing

Authors: Jaeseung C. Kim, Philip C. Zuzarte, Tracy Murphy, Michelle Chan-Seng-Yue, Andrew M. K. Brown, Paul M. Krzyzanowski, Adam C. Smith, Faiyaz Notta, Mark D. Minden & John D. McPherson

Reference: Leukemia - Nature

DOI: 10.1038/s41375-019-0546-1

Year: 2020

A genetic roadmap of pancreatic cancer: still evolving

Authors: Faiyaz Notta, Stephan A Hahn Francisco X Real

Reference: Gut

DOI: 10.1136/gutjnl-2016-313317

Year: 2019